Missing-Data-Robust Medical Imaging Model

Missing-Data-Robust Medical Imaging Model

external-link

Apr 2026

Finished

Medical model for robust survival prediction in glioblastoma. Stage 1: self-supervised pretraining (SSL) on the BraTS brain tumor segmentation dataset, learning generic 3D image representations. Stage 2: fine-tuning the pretrained encoder for survival time prediction using the UPenn-GBM dataset with multimodal clinical and imaging data (NIfTI). Stage 3: evaluation on predefined data partitions. Architecture uses PyTorch with automatic GPU acceleration, YAML-based configuration via dataclass, early stopping, automatic checkpointing, and deterministic seeding. Designed to handle missing data in real clinical environments.

Technologies
ai

AI

jupyter

Jupyter

latex

LaTeX

numpy

NumPy

pandas

Pandas

plotly

Plotly

python

Python

pytorch

PyTorch

sklearn

Sklearn

https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/UPENN-GBM-00465.gif
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/final.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/gomaa_architecture.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/init.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/newplot.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/radiomic_segmentation.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/UPENN-GBM-00465.gif
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/final.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/gomaa_architecture.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/init.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/newplot.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/radiomic_segmentation.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/UPENN-GBM-00465.gif
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/final.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/gomaa_architecture.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/init.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/newplot.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/radiomic_segmentation.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/UPENN-GBM-00465.gif
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/final.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/gomaa_architecture.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/init.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/newplot.png
https://raw.githubusercontent.com/MiquelGomezCorral/ARA-Medical-MissingData-Robust-Model/main/readme-images/radiomic_segmentation.png